CID 16204887

Oligo c 5'-thiol

Structural Information

Molecular Formula
C177H212N57O101P15S16
SMILES
C1=CC2=C(C=C1C(=O)OC3C(OC(C3O)N4C=CC(=NC4=O)N)COP(=S)(O)OC5C(OC(C5O)N6C=CC(=O)NC6=O)COP(=O)(OC7C(OC(C7O)N8C=NC9=C(N=CN=C98)N)COP(=S)(O)OC1C(OC(C1O)N1C=NC3=C1N=C(NC3=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=NC3=C(N=CN=C31)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=O)NC1=O)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=NC3=C1N=C(NC3=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=NC3=C1N=C(NC3=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=NC3=C(N=CN=C31)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=O)NC1=O)COP(=S)(O)OC1C(OC(C1O)N1C=CC(=NC1=O)N)COCCCCCCS)S)C1(C3=C(C=C(C=C3)O)OC3=C1C=CC(=C3)O)OC2=O
InChI
InChI=1S/C177H212N57O101P15S16/c178-86-11-21-219(167(261)203-86)146-102(240)118(319-162(259)61-5-8-64-67(33-61)177(320-163(64)260)65-9-6-62(235)34-68(65)302-69-35-63(236)7-10-66(69)177)71(304-146)37-287-336(271,352)322-125-78(311-153(109(125)247)226-28-18-93(237)210-174(226)268)45-295-345(280,361)330-128-82(315-156(112(128)250)229-55-197-96-134(185)191-52-194-137(96)229)48-298-349(284,365)334-132-83(316-160(116(132)254)233-59-201-100-141(233)214-165(189)217-144(100)257)49-299-347(282,363)331-129-81(314-157(113(129)251)230-56-198-97-135(186)192-53-195-138(97)230)47-297-344(279,360)327-124-75(308-152(108(124)246)225-27-17-92(184)209-173(225)267)41-292-342(277,358)329-127-79(312-155(111(127)249)228-30-20-95(239)212-176(228)270)44-293-340(275,356)325-122-76(309-150(106(122)244)223-25-15-90(182)207-171(223)265)42-294-346(281,362)333-131-85(318-159(115(131)253)232-58-200-99-140(232)213-164(188)216-143(99)256)51-301-350(285,366)335-133-84(317-161(117(133)255)234-60-202-101-142(234)215-166(190)218-145(101)258)50-300-348(283,364)332-130-80(313-158(114(130)252)231-57-199-98-136(187)193-54-196-139(98)231)46-296-343(278,359)326-123-74(307-151(107(123)245)224-26-16-91(183)208-172(224)266)39-290-339(274,355)323-120-72(305-148(104(120)242)221-23-13-88(180)205-169(221)263)38-289-338(273,354)324-121-73(306-149(105(121)243)222-24-14-89(181)206-170(222)264)40-291-341(276,357)328-126-77(310-154(110(126)248)227-29-19-94(238)211-175(227)269)43-288-337(272,353)321-119-70(36-286-31-3-1-2-4-32-351)303-147(103(119)241)220-22-12-87(179)204-168(220)262/h5-30,33-35,52-60,70-85,102-133,146-161,235-236,240-255,351H,1-4,31-32,36-51H2,(H,271,352)(H,272,353)(H,273,354)(H,274,355)(H,275,356)(H,276,357)(H,277,358)(H,278,359)(H,279,360)(H,280,361)(H,281,362)(H,282,363)(H,283,364)(H,284,365)(H,285,366)(H2,178,203,261)(H2,179,204,262)(H2,180,205,263)(H2,181,206,264)(H2,182,207,265)(H2,183,208,266)(H2,184,209,267)(H2,185,191,194)(H2,186,192,195)(H2,187,193,196)(H,210,237,268)(H,211,238,269)(H,212,239,270)(H3,188,213,216,256)(H3,189,214,217,257)(H3,190,215,218,258)
InChIKey
VDYXNKKHDLJEPV-UHFFFAOYSA-N
Compound name
[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[5-(4-amino-2-oxopyrimidin-1-yl)-2-[[[5-(4-amino-2-oxopyrimidin-1-yl)-2-[[[5-(4-amino-2-oxopyrimidin-1-yl)-2-[[[2-[[[5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxy-2-(6-sulfanylhexoxymethyl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-sulfanylphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl] 3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

5727.48 Da
Monoisotopic Mass

-18.5
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 5728.4873 311.6
[M+Na]+ 5750.4692 311.6
[M-H]- 5726.4727 311.6
[M+NH4]+ 5745.5138 311.6
[M+K]+ 5766.4432 311.6
[M+H-H2O]+ 5710.4773 311.6
[M+HCOO]- 5772.4782 311.6
[M+CH3COO]- 5786.4939 311.6
[M+Na-2H]- 5748.4547 311.6
[M]+ 5727.4795 311.6
[M]- 5727.4805 311.6
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.