CID 16197781

Oligo b 5'-capped thiol

Structural Information

Molecular Formula
C177H207N42O90P11S2
SMILES
CC1=CN(C(=O)N=C1N)C2C3C(C(O2)(CO3)COP(=O)(O)OC4C(OC(C4OC)N5C=NC6=C5N=C(NC6=O)N)COP(=O)(O)OC7C(OC(C7OC)N8C=NC9=C8N=C(NC9=O)N)COP(=O)(O)OC1C(OC(C1OC)N1C=NC2=C(N=CN=C21)N)COP(=O)(O)OC1C2C(OC1(CO2)COP(=O)(O)OC1C(OC(C1OC)N1C=CC(=NC1=O)N)COP(=O)(O)OC1C2C(OC1(CO2)COP(=O)(O)OC1C(OC(C1OC)N1C=CC(=O)NC1=O)COP(=O)(O)OC1C2C(OC1(CO2)COSSCCCCCCC(C1=CC=CC=C1)(C1=CC=C(C=C1)OC)C1=CC=C(C=C1)OC)N1C=C(C(=NC1=O)N)C)N1C=C(C(=NC1=O)N)C)N1C=C(C(=NC1=O)N)C)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=O)NC1=O)OC)OP(=O)(O)OCC12COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C(N=CN=C31)N)OC)OC(=O)C1=CC3=C(C=C1)C(=O)OC31C3=C(C=C(C=C3)O)OC3=C1C=CC(=C3)O)C(O2)N1C=C(C(=NC1=O)N)C
InChI
InChI=1S/C177H207N42O90P11S2/c1-77-49-211(166(231)199-134(77)179)154-124-129(305-312(240,241)274-54-96-110(117(260-8)150(285-96)216-73-192-106-139(184)188-71-190-141(106)216)292-159(226)82-24-35-90-93(46-82)177(298-160(90)227)91-36-29-86(220)47-94(91)284-95-48-87(221)30-37-92(95)177)171(293-154,61-267-124)66-280-318(252,253)302-112-98(287-148(119(112)262-10)209-43-39-104(222)197-164(209)229)58-276-314(244,245)307-131-126-156(213-51-79(3)136(181)201-168(213)233)296-174(131,64-270-126)69-282-320(256,257)304-116-101(291-153(123(116)266-14)219-76-195-109-144(219)205-162(187)207-146(109)225)56-273-311(238,239)300-115-100(290-152(122(115)265-13)218-75-194-108-143(218)204-161(186)206-145(108)224)55-272-310(236,237)299-114-102(289-151(121(114)264-12)217-74-193-107-140(185)189-72-191-142(107)217)60-278-315(246,247)308-132-127-157(214-52-80(4)137(182)202-169(214)234)295-173(132,63-269-127)67-279-317(250,251)301-111-97(286-147(118(111)261-9)208-42-38-103(178)196-163(208)228)57-275-313(242,243)306-130-125-155(212-50-78(2)135(180)200-167(212)232)294-172(130,62-268-125)68-281-319(254,255)303-113-99(288-149(120(113)263-11)210-44-40-105(223)198-165(210)230)59-277-316(248,249)309-133-128-158(215-53-81(5)138(183)203-170(215)235)297-175(133,65-271-128)70-283-322-321-45-21-16-15-20-41-176(83-22-18-17-19-23-83,84-25-31-88(258-6)32-26-84)85-27-33-89(259-7)34-28-85/h17-19,22-40,42-44,46-53,71-76,96-102,110-133,147-158,220-221H,15-16,20-21,41,45,54-70H2,1-14H3,(H,236,237)(H,238,239)(H,240,241)(H,242,243)(H,244,245)(H,246,247)(H,248,249)(H,250,251)(H,252,253)(H,254,255)(H,256,257)(H2,178,196,228)(H2,179,199,231)(H2,180,200,232)(H2,181,201,233)(H2,182,202,234)(H2,183,203,235)(H2,184,188,190)(H2,185,189,191)(H,197,222,229)(H,198,223,230)(H3,186,204,206,224)(H3,187,205,207,225)
InChIKey
ICALAUBKWFIBPN-UHFFFAOYSA-N
Compound name
[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[2-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[7,7-bis(4-methoxyphenyl)-7-phenylheptyl]disulfanyl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-methoxyoxolan-3-yl] 3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

4764.947 Da
Monoisotopic Mass

-18.6
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 4765.9543 311.9
[M+Na]+ 4787.9362 312.2
[M-H]- 4763.9397 312.0
[M+NH4]+ 4782.9808 312.0
[M+K]+ 4803.9102 312.0
[M+H-H2O]+ 4747.9443 311.8
[M+HCOO]- 4809.9452 312.0
[M+CH3COO]- 4823.9609 312.0
[M+Na-2H]- 4785.9217 312.3
[M]+ 4764.9465 312.2
[M]- 4764.9475 312.2
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.