CID 16197780

Oligo b 5'-thiol

Structural Information

Molecular Formula
C156H189N42O88P11S
SMILES
CC1=CN(C(=O)N=C1N)C2C3C(C(O2)(CO3)COCCCCCCS)OP(=O)(O)OCC4C(C(C(O4)N5C=CC(=O)NC5=O)OC)OP(=O)(O)OCC67COC(C6OP(=O)(O)OCC8C(C(C(O8)N9C=CC(=NC9=O)N)OC)OP(=O)(O)OCC12COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C(N=CN=C31)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C1N=C(NC3=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C1N=C(NC3=O)N)OC)OP(=O)(O)OCC13COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=O)NC1=O)OC)OP(=O)(O)OCC14COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=NC5=C(N=CN=C51)N)OC)OC(=O)C1=CC5=C(C=C1)C(=O)OC51C5=C(C=C(C=C5)O)OC5=C1C=CC(=C5)O)C(O4)N1C=C(C(=NC1=O)N)C)C(O3)N1C=C(C(=NC1=O)N)C)C(O2)N1C=C(C(=NC1=O)N)C)C(O7)N1C=C(C(=NC1=O)N)C
InChI
InChI=1S/C156H189N42O88P11S/c1-62-34-190(146(210)178-114(62)158)134-104-109(151(270-134,47-245-104)46-244-29-15-13-14-16-30-298)282-290(221,222)253-43-78-92(99(239-8)128(264-78)188-27-24-84(201)176-144(188)208)279-296(233,234)259-54-153-49-247-106(136(272-153)192-36-64(3)116(160)180-148(192)212)111(153)284-291(223,224)254-42-77-91(98(238-7)127(263-77)187-26-23-83(157)175-143(187)207)278-294(229,230)257-53-154-50-248-108(138(273-154)194-38-66(5)118(162)182-150(194)214)113(154)286-293(227,228)256-45-82-94(101(241-10)131(266-82)196-59-172-87-120(164)168-57-170-122(87)196)276-287(215,216)250-40-80-95(102(242-11)132(267-80)197-60-173-88-123(197)183-141(165)185-125(88)203)277-288(217,218)251-41-81-96(103(243-12)133(268-81)198-61-174-89-124(198)184-142(166)186-126(89)204)281-297(235,236)260-55-155-51-249-107(137(274-155)193-37-65(4)117(161)181-149(193)213)112(155)285-292(225,226)255-44-79-93(100(240-9)129(265-79)189-28-25-85(202)177-145(189)209)280-295(231,232)258-52-152-48-246-105(135(271-152)191-35-63(2)115(159)179-147(191)211)110(152)283-289(219,220)252-39-76-90(97(237-6)130(262-76)195-58-171-86-119(163)167-56-169-121(86)195)269-139(205)67-17-20-70-73(31-67)156(275-140(70)206)71-21-18-68(199)32-74(71)261-75-33-69(200)19-22-72(75)156/h17-28,31-38,56-61,76-82,90-113,127-138,199-200,298H,13-16,29-30,39-55H2,1-12H3,(H,215,216)(H,217,218)(H,219,220)(H,221,222)(H,223,224)(H,225,226)(H,227,228)(H,229,230)(H,231,232)(H,233,234)(H,235,236)(H2,157,175,207)(H2,158,178,210)(H2,159,179,211)(H2,160,180,212)(H2,161,181,213)(H2,162,182,214)(H2,163,167,169)(H2,164,168,170)(H,176,201,208)(H,177,202,209)(H3,165,183,185,203)(H3,166,184,186,204)
InChIKey
IMGVZJIIPGKPHM-UHFFFAOYSA-N
Compound name
[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[2-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-[[[2-[[[3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-1-(6-sulfanylhexoxymethyl)-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-2,5-dioxabicyclo[2.2.1]heptan-7-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-methoxyoxolan-3-yl] 3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carboxylate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

4430.8438 Da
Monoisotopic Mass

-25.1
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 4431.8511 311.8
[M+Na]+ 4453.8330 312.1
[M-H]- 4429.8365 311.9
[M+NH4]+ 4448.8776 311.9
[M+K]+ 4469.8070 311.8
[M+H-H2O]+ 4413.8411 311.5
[M+HCOO]- 4475.8420 311.9
[M+CH3COO]- 4489.8577 311.8
[M+Na-2H]- 4451.8185 312.3
[M]+ 4430.8433 312.1
[M]- 4430.8443 312.1
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

literature stripe

Patent stripe

No patent data available for this compound.