CID 16186567

5'-trityl-d(tgggag)-3'-phosphorothioate

Structural Information

Molecular Formula
C80H93N27O36P6S
SMILES
CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COC(C3=CC=CC=C3)(C4=CC=CC=C4)C5=CC=CC=C5)OP(=O)(O)OC[C@@H]6[C@H](C[C@@H](O6)N7C=NC8=C7N=C(NC8=O)N)OP(=O)(O)OC[C@@H]9[C@H](C[C@@H](O9)N(C)C1=C(C(=O)NC(=N1)N)N=C)OP(=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OC[C@@H]1[C@H](CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)O
InChI
InChI=1S/C80H93N27O36P6S/c1-37-25-103(79(113)101-70(37)108)54-20-42(47(133-54)26-126-80(38-13-7-4-8-14-38,39-15-9-5-10-16-39)40-17-11-6-12-18-40)139-145(116,117)129-30-51-44(22-56(136-51)105-34-90-61-67(105)94-76(83)98-72(61)110)141-146(118,119)127-27-48-41(19-53(132-48)102(3)66-60(86-2)71(109)97-75(82)93-66)138-144(114,115)128-29-50-45(23-57(135-50)106-35-91-62-68(106)95-77(84)99-73(62)111)142-147(120,121)130-28-49-43(21-55(134-49)104-33-89-59-64(81)87-32-88-65(59)104)140-148(122,123)131-31-52-46(143-149(124,125)150)24-58(137-52)107-36-92-63-69(107)96-78(85)100-74(63)112/h4-18,25,32-36,41-58H,2,19-24,26-31H2,1,3H3,(H,114,115)(H,116,117)(H,118,119)(H,120,121)(H,122,123)(H2,81,87,88)(H,101,108,113)(H2,124,125,150)(H3,82,93,97,109)(H3,83,94,98,110)(H3,84,95,99,111)(H3,85,96,100,112)/t41-,42-,43-,44-,45-,46-,47+,48+,49+,50+,51+,52+,53+,54+,55?,56+,57+,58+/m0/s1
InChIKey
FYBJDOFKYGWQNS-JWRRUIDMSA-N
Compound name
[(2R,3S,5R)-3-[[(2R,3S,5R)-5-[[2-amino-5-(methylideneamino)-6-oxo-1H-pyrimidin-4-yl]-methylamino]-3-[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[(2R,3S)-3-[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-dihydroxyphosphinothioyloxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(2-amino-6-oxo-1H-purin-9-yl)oxolan-2-yl]methyl [(2R,3S,5R)-5-(5-methyl-2,4-dioxopyrimidin-1-yl)-2-(trityloxymethyl)oxolan-3-yl] hydrogen phosphate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

0
References

0
Patents

2225.4424 Da
Monoisotopic Mass

-5.3
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 2226.4497 249.5
[M+Na]+ 2248.4316 261.3
[M-H]- 2224.4351 250.8
[M+NH4]+ 2243.4762 253.8
[M+K]+ 2264.4056 257.1
[M+H-H2O]+ 2208.4397 247.1
[M+HCOO]- 2270.4406 254.4
[M+CH3COO]- 2284.4563 255.8
[M+Na-2H]- 2246.4171 261.5
[M]+ 2225.4419 259.9
[M]- 2225.4429 259.9
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.