CID 16186532

5'-trityl-d(tgggag)-3'-phosphorothioate, hydroxyethyl ester

Structural Information

Molecular Formula
C81H93N27O37P6S
SMILES
CC1=CN(C(=O)NC1=O)[C@H]2C[C@@H]([C@H](O2)COC(C3=CC=CC=C3)(C4=CC=CC=C4)C5=CC=CC=C5)OP(=O)(O)OC[C@@H]6[C@H](C[C@@H](O6)N7C=NC8=C7N=C(NC8=O)N)OP(=O)(O)OC[C@@H]9[C@H](C[C@@H](O9)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OC[C@@H]1[C@H](CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OC[C@@H]1[C@H](C[C@@H](O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCCO
InChI
InChI=1S/C81H93N27O37P6S/c1-38-25-103(80(115)102-71(38)110)54-19-42(48(134-54)26-127-81(39-11-5-2-6-12-39,40-13-7-3-8-14-40)41-15-9-4-10-16-41)140-146(116,117)129-28-50-44(21-56(136-50)105-34-90-61-67(105)94-76(83)98-72(61)111)143-148(120,121)131-30-52-46(23-58(138-52)107-36-92-63-69(107)96-78(85)100-74(63)113)144-149(122,123)132-29-51-45(22-57(137-51)106-35-91-62-68(106)95-77(84)99-73(62)112)142-147(118,119)130-27-49-43(20-55(135-49)104-33-89-60-65(82)87-32-88-66(60)104)141-150(124,125)133-31-53-47(145-151(126,152)128-18-17-109)24-59(139-53)108-37-93-64-70(108)97-79(86)101-75(64)114/h2-16,25,32-37,42-59,109H,17-24,26-31H2,1H3,(H,116,117)(H,118,119)(H,120,121)(H,122,123)(H,124,125)(H,126,152)(H2,82,87,88)(H,102,110,115)(H3,83,94,98,111)(H3,84,95,99,112)(H3,85,96,100,113)(H3,86,97,101,114)/t42-,43-,44-,45-,46-,47-,48+,49+,50+,51+,52+,53+,54+,55?,56+,57+,58+,59+,151?/m0/s1
InChIKey
SSKPKNPHTBREEP-QDOGBAQXSA-N
Compound name
[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[(2R,3S)-3-[[(2R,3S,5R)-5-(2-amino-6-oxo-1H-purin-9-yl)-3-[hydroxy(2-hydroxyethoxy)phosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methyl [(2R,3S,5R)-5-(5-methyl-2,4-dioxopyrimidin-1-yl)-2-(trityloxymethyl)oxolan-3-yl] hydrogen phosphate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

2253.4373 Da
Monoisotopic Mass

-7.0
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 2254.4446 239.3
[M+Na]+ 2276.4265 250.7
[M-H]- 2252.4300 239.5
[M+NH4]+ 2271.4711 243.3
[M+K]+ 2292.4005 246.7
[M+H-H2O]+ 2236.4346 238.0
[M+HCOO]- 2298.4355 244.2
[M+CH3COO]- 2312.4512 246.0
[M+Na-2H]- 2274.4120 248.4
[M]+ 2253.4368 249.9
[M]- 2253.4378 249.9
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.