CID 16134054

5'-r(gccaauggucacaacacga)-3'

Structural Information

Molecular Formula
C182H227N77O126P18
SMILES
C1=CN(C(=O)N=C1N)C2C(C(C(O2)COP(=O)(O)OC3C(OC(C3O)N4C=NC5=C4N=C(NC5=O)N)CO)OP(=O)(O)OCC6C(C(C(O6)N7C=CC(=NC7=O)N)O)OP(=O)(O)OCC8C(C(C(O8)N9C=NC1=C(N=CN=C19)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=O)NC1=O)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=O)NC1=O)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)O)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)O)O)O
InChI
InChI=1S/C182H227N77O126P18/c183-73-1-9-241(175(287)225-73)153-95(266)113(56(351-153)19-332-387(297,298)368-112-54(17-260)349-167(94(112)265)256-50-221-88-144(256)233-171(196)237-148(88)283)369-388(299,300)333-20-57-114(96(267)154(352-57)242-10-2-74(184)226-176(242)288)370-391(305,306)342-29-66-125(107(278)165(361-66)254-48-219-86-135(194)205-41-212-142(86)254)383-402(327,328)345-32-69-124(106(277)164(364-69)253-47-218-85-134(193)204-40-211-141(85)253)381-399(321,322)338-25-62-120(102(273)160(357-62)248-16-8-80(262)232-182(248)294)376-395(313,314)347-34-71-129(111(282)170(366-71)259-53-224-91-147(259)236-174(199)240-151(91)286)385-403(329,330)348-35-72-128(110(281)169(367-72)258-52-223-90-146(258)235-173(198)239-150(90)285)384-400(323,324)339-26-63-119(101(272)159(358-63)247-15-7-79(261)231-181(247)293)375-389(301,302)334-21-58-115(97(268)155(353-58)243-11-3-75(185)227-177(243)289)371-390(303,304)340-27-64-121(103(274)161(359-64)250-44-215-82-131(190)201-37-208-138(82)250)378-396(315,316)335-22-59-117(99(270)157(354-59)245-13-5-77(187)229-179(245)291)373-393(309,310)343-30-67-126(108(279)166(362-67)255-49-220-87-136(195)206-42-213-143(87)255)382-401(325,326)344-31-68-123(105(276)163(363-68)252-46-217-84-133(192)203-39-210-140(84)252)380-398(319,320)336-23-60-116(98(269)156(355-60)244-12-4-76(186)228-178(244)290)372-392(307,308)341-28-65-122(104(275)162(360-65)251-45-216-83-132(191)202-38-209-139(83)251)379-397(317,318)337-24-61-118(100(271)158(356-61)246-14-6-78(188)230-180(246)292)374-394(311,312)346-33-70-127(109(280)168(365-70)257-51-222-89-145(257)234-172(197)238-149(89)284)377-386(295,296)331-18-55-92(263)93(264)152(350-55)249-43-214-81-130(189)200-36-207-137(81)249/h1-16,36-72,92-129,152-170,260,263-282H,17-35H2,(H,295,296)(H,297,298)(H,299,300)(H,301,302)(H,303,304)(H,305,306)(H,307,308)(H,309,310)(H,311,312)(H,313,314)(H,315,316)(H,317,318)(H,319,320)(H,321,322)(H,323,324)(H,325,326)(H,327,328)(H,329,330)(H2,183,225,287)(H2,184,226,288)(H2,185,227,289)(H2,186,228,290)(H2,187,229,291)(H2,188,230,292)(H2,189,200,207)(H2,190,201,208)(H2,191,202,209)(H2,192,203,210)(H2,193,204,211)(H2,194,205,212)(H2,195,206,213)(H,231,261,293)(H,232,262,294)(H3,196,233,237,283)(H3,197,234,238,284)(H3,198,235,239,285)(H3,199,236,240,286)
InChIKey
IRXVNAKGQIQSSK-UHFFFAOYSA-N
Compound name
[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(6-aminopurin-9-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-hydroxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-hydroxyoxolan-3-yl] [5-(6-aminopurin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl hydrogen phosphate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

6063.9 Da
Monoisotopic Mass

-56.9
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 6064.9073 311.5
[M+Na]+ 6086.8892 311.5
[M-H]- 6062.8927 311.5
[M+NH4]+ 6081.9338 311.5
[M+K]+ 6102.8632 311.5
[M+H-H2O]+ 6046.8973 311.5
[M+HCOO]- 6108.8982 311.5
[M+CH3COO]- 6122.9139 311.5
[M+Na-2H]- 6084.8747 311.5
[M]+ 6063.8995 311.5
[M]- 6063.9005 311.5
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.