CID 16133924

Octadecamine oligonucleotide

Structural Information

Molecular Formula
C229H307N81O133P22
SMILES
CCCCCCCCCCCCCCCCCCNP(=O)(O)OCC1C(CC(O1)N2C=C(C(=O)NC2=O)C)OP(=O)(O)OCC3C(CC(O3)N4C=NC5=C4N=C(NC5=O)N)OP(=O)(O)OCC6C(CC(O6)N7C=NC8=C7N=C(NC8=O)N)OP(=O)(O)OCC9C(CC(O9)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)O
InChI
InChI=1S/C229H307N81O133P22/c1-6-7-8-9-10-11-12-13-14-15-16-17-18-19-20-21-31-263-444(335,336)379-68-128-114(50-167(410-128)298-63-101(2)201(312)285-226(298)331)431-454(355,356)398-86-146-126(62-179(420-146)310-100-262-188-200(310)278-216(247)284-210(188)321)443-465(377,378)400-88-148-123(59-176(422-148)307-97-259-185-197(307)275-213(244)281-207(185)318)440-461(369,370)388-76-136-113(49-166(409-136)297-40-30-157(238)272-225(297)330)430-453(353,354)397-85-145-124(60-177(419-145)308-98-260-186-198(308)276-214(245)282-208(186)319)441-462(371,372)391-79-139-117(53-170(413-139)301-66-104(5)204(315)288-229(301)334)434-457(361,362)394-82-142-119(55-172(416-142)303-93-255-181-190(240)249-90-252-193(181)303)437-459(365,366)386-74-134-108(44-161(407-134)292-35-25-152(233)267-220(292)325)425-448(343,344)389-77-137-115(51-168(411-137)299-64-102(3)202(313)286-227(299)332)432-455(357,358)383-71-131-111(47-164(404-131)295-38-28-155(236)270-223(295)328)427-450(347,348)392-80-140-118(54-171(414-140)302-92-254-180-189(239)248-89-251-192(180)302)436-458(363,364)385-73-133-106(42-159(406-133)290-33-23-150(231)265-218(290)323)423-446(339,340)381-69-129-109(45-162(402-129)293-36-26-153(234)268-221(293)326)426-449(345,346)393-81-141-120(56-173(415-141)304-94-256-182-191(241)250-91-253-194(182)304)438-464(375,376)399-87-147-125(61-178(421-147)309-99-261-187-199(309)277-215(246)283-209(187)320)442-463(373,374)390-78-138-116(52-169(412-138)300-65-103(4)203(314)287-228(300)333)433-456(359,360)384-72-132-112(48-165(405-132)296-39-29-156(237)271-224(296)329)429-452(351,352)396-84-144-122(58-175(418-144)306-96-258-184-196(306)274-212(243)280-206(184)317)439-460(367,368)387-75-135-107(43-160(408-135)291-34-24-151(232)266-219(291)324)424-447(341,342)382-70-130-110(46-163(403-130)294-37-27-154(235)269-222(294)327)428-451(349,350)395-83-143-121(57-174(417-143)305-95-257-183-195(305)273-211(242)279-205(183)316)435-445(337,338)380-67-127-105(311)41-158(401-127)289-32-22-149(230)264-217(289)322/h22-30,32-40,63-66,89-100,105-148,158-179,311H,6-21,31,41-62,67-88H2,1-5H3,(H,337,338)(H,339,340)(H,341,342)(H,343,344)(H,345,346)(H,347,348)(H,349,350)(H,351,352)(H,353,354)(H,355,356)(H,357,358)(H,359,360)(H,361,362)(H,363,364)(H,365,366)(H,367,368)(H,369,370)(H,371,372)(H,373,374)(H,375,376)(H,377,378)(H2,230,264,322)(H2,231,265,323)(H2,232,266,324)(H2,233,267,325)(H2,234,268,326)(H2,235,269,327)(H2,236,270,328)(H2,237,271,329)(H2,238,272,330)(H2,239,248,251)(H2,240,249,252)(H2,241,250,253)(H2,263,335,336)(H,285,312,331)(H,286,313,332)(H,287,314,333)(H,288,315,334)(H3,242,273,279,316)(H3,243,274,280,317)(H3,244,275,281,318)(H3,245,276,282,319)(H3,246,277,283,320)(H3,247,278,284,321)
InChIKey
OLAPHMFMQDYFCB-UHFFFAOYSA-N
Compound name
[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-N-octadecylphosphonamidic acid
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

0
References

0
Patents

7000.3975 Da
Monoisotopic Mass

-38.3
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 7001.4048 311.5
[M+Na]+ 7023.3867 311.5
[M-H]- 6999.3902 311.5
[M+NH4]+ 7018.4313 311.5
[M+K]+ 7039.3607 311.5
[M+H-H2O]+ 6983.3948 311.5
[M+HCOO]- 7045.3957 311.5
[M+CH3COO]- 7059.4114 311.5
[M+Na-2H]- 7021.3722 311.5
[M]+ 7000.3970 311.5
[M]- 7000.3980 311.5
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.