5'-d[gactggggcgaggtaggggt]-3' phosphorothioate oligonucleotide

Structural Information

Molecular Formula

C₁₉₈H₂₄₄N₈₇O₉₉P₁₉S₁₉

SMILES

CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=S)(O)OC3CC(OC3COP(=S)(O)OC4CC(OC4COP(=S)(O)OC5CC(OC5COP(=S)(O)OC6CC(OC6COP(=S)(O)OC7CC(OC7COP(=S)(O)OC8CC(OC8COP(=S)(O)OC9CC(OC9COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=O)(OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1CO)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=CC(=NC1=O)N)N1C=C(C(=O)NC1=O)C)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)S)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=CC(=NC1=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=C(C(=O)NC1=O)C)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)O

InChI

InChI=1S/C198H244N87O99P19S19/c1-69-28-268(196(305)263-167(69)288)114-8-72(287)93(347-114)32-327-385(308,404)371-81-17-123(275-58-226-138-156(275)240-183(205)252-171(138)292)355-101(81)40-339-397(320,416)379-88-24-130(282-65-233-145-163(282)247-190(212)259-178(145)299)362-108(88)47-344-402(325,421)384-91-27-133(285-68-236-148-166(285)250-193(215)262-181(148)302)364-110(91)49-343-401(324,420)381-87-23-129(281-64-232-144-162(281)246-189(211)258-177(144)298)358-104(87)43-337-394(317,413)373-79-15-120(272-55-223-135-150(202)217-52-220-153(135)272)353-99(79)38-333-389(312,408)369-77-13-118(270-30-71(3)169(290)265-198(270)307)351-97(77)36-332-393(316,412)376-83-19-125(277-60-228-140-158(277)242-185(207)254-173(140)294)361-107(83)46-341-400(323,419)380-86-22-128(280-63-231-143-161(280)245-188(210)257-176(143)297)359-105(86)44-338-395(318,414)374-80-16-121(273-56-224-136-151(203)218-53-221-154(136)273)354-100(80)39-334-396(319,415)377-84-20-126(278-61-229-141-159(278)243-186(208)255-174(141)295)356-102(84)41-335-388(311,407)368-75-11-116(267-7-5-113(200)238-195(267)304)349-95(75)34-330-392(315,411)375-82-18-124(276-59-227-139-157(276)241-184(206)253-172(139)293)360-106(82)45-340-399(322,418)382-89-25-131(283-66-234-146-164(283)248-191(213)260-179(146)300)365-111(89)50-345-403(326,422)383-90-26-132(284-67-235-147-165(284)249-192(214)261-180(147)301)363-109(90)48-342-398(321,417)378-85-21-127(279-62-230-142-160(279)244-187(209)256-175(142)296)357-103(85)42-336-390(313,409)370-76-12-117(269-29-70(2)168(289)264-197(269)306)350-96(76)35-331-387(310,406)367-74-10-115(266-6-4-112(199)237-194(266)303)348-94(74)33-329-391(314,410)372-78-14-119(271-54-222-134-149(201)216-51-219-152(134)271)352-98(78)37-328-386(309,405)366-73-9-122(346-92(73)31-286)274-57-225-137-155(274)239-182(204)251-170(137)291/h4-7,28-30,51-68,72-111,114-133,286-287H,8-27,31-50H2,1-3H3,(H,308,404)(H,309,405)(H,310,406)(H,311,407)(H,312,408)(H,313,409)(H,314,410)(H,315,411)(H,316,412)(H,317,413)(H,318,414)(H,319,415)(H,320,416)(H,321,417)(H,322,418)(H,323,419)(H,324,420)(H,325,421)(H,326,422)(H2,199,237,303)(H2,200,238,304)(H2,201,216,219)(H2,202,217,220)(H2,203,218,221)(H,263,288,305)(H,264,289,306)(H,265,290,307)(H3,204,239,251,291)(H3,205,240,252,292)(H3,206,241,253,293)(H3,207,242,254,294)(H3,208,243,255,295)(H3,209,244,256,296)(H3,210,245,257,297)(H3,211,246,258,298)(H3,212,247,259,299)(H3,213,248,260,300)(H3,214,249,261,301)(H3,215,250,262,302)

InChIKey

LUXJXYVMQSHOJH-UHFFFAOYSA-N

Compound name

1-[5-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-(hydroxymethyl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-sulfanylphosphoryl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-hydroxyoxolan-2-yl]-5-methylpyrimidine-2,4-dione

Related CIDs

• CID 16133535