CID 16133533
5'-d[ggggagaccgaaaccgcaaa]-3' phosphorothioate oligonucleotide
Structural Information
- Molecular Formula
- C195H241N90O91P19S19
- SMILES
- C1C(C(OC1N2C=NC3=C(N=CN=C32)N)COP(=S)(O)OC4CC(OC4COP(=S)(O)OC5CC(OC5COP(=S)(O)OC6CC(OC6COP(=S)(O)OC7CC(OC7COP(=S)(O)OC8CC(OC8COP(=S)(O)OC9CC(OC9COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1COP(=O)(OC1CC(OC1COP(=S)(O)OC1CC(OC1CO)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)S)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=CC(=NC1=O)N)N1C=CC(=NC1=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)N1C=CC(=NC1=O)N)N1C=CC(=NC1=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=CC(=NC1=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)O
- InChI
- InChI=1S/C195H241N90O91P19S19/c196-114-1-6-266(191(295)247-114)120-13-76(359-379(302,398)321-33-96-78(15-122(340-96)268-8-3-116(198)249-193(268)297)362-382(305,401)333-46-109-89(26-134(353-109)281-69-242-149-172(281)254-186(211)261-179(149)290)371-386(309,405)325-37-100-80(17-124(344-100)270-10-5-118(200)251-195(270)299)361-381(304,400)326-39-102-84(21-128(346-102)275-63-236-143-158(205)220-55-228-166(143)275)367-387(310,406)327-38-101-81(18-125(345-101)272-60-233-140-155(202)217-52-225-163(140)272)364-377(300,396)319-32-95-74(287)11-119(339-95)271-59-232-139-154(201)216-51-224-162(139)271)98(342-120)35-323-384(307,403)365-82-19-126(273-61-234-141-156(203)218-53-226-164(141)273)347-103(82)40-328-388(311,407)368-85-22-129(276-64-237-144-159(206)221-56-229-167(144)276)348-104(85)41-329-389(312,408)369-86-23-130(277-65-238-145-160(207)222-57-230-168(145)277)350-106(86)43-331-391(314,410)373-90-27-135(282-70-243-150-173(282)255-187(212)262-180(150)291)354-110(90)47-334-383(306,402)363-79-16-123(269-9-4-117(199)250-194(269)298)341-97(79)34-322-380(303,399)360-77-14-121(267-7-2-115(197)248-192(267)296)343-99(77)36-324-385(308,404)366-83-20-127(274-62-235-142-157(204)219-54-227-165(142)274)349-105(83)42-330-392(315,411)374-91-28-136(283-71-244-151-174(283)256-188(213)263-181(151)292)355-111(91)48-335-390(313,409)370-87-24-131(278-66-239-146-161(208)223-58-231-169(146)278)351-107(87)44-332-393(316,412)375-92-29-137(284-72-245-152-175(284)257-189(214)264-182(152)293)356-112(92)49-337-395(318,414)376-93-30-138(285-73-246-153-176(285)258-190(215)265-183(153)294)357-113(93)50-336-394(317,413)372-88-25-133(280-68-241-148-171(280)253-185(210)260-178(148)289)352-108(88)45-320-378(301,397)358-75-12-132(338-94(75)31-286)279-67-240-147-170(279)252-184(209)259-177(147)288/h1-10,51-113,119-138,286-287H,11-50H2,(H,300,396)(H,301,397)(H,302,398)(H,303,399)(H,304,400)(H,305,401)(H,306,402)(H,307,403)(H,308,404)(H,309,405)(H,310,406)(H,311,407)(H,312,408)(H,313,409)(H,314,410)(H,315,411)(H,316,412)(H,317,413)(H,318,414)(H2,196,247,295)(H2,197,248,296)(H2,198,249,297)(H2,199,250,298)(H2,200,251,299)(H2,201,216,224)(H2,202,217,225)(H2,203,218,226)(H2,204,219,227)(H2,205,220,228)(H2,206,221,229)(H2,207,222,230)(H2,208,223,231)(H3,209,252,259,288)(H3,210,253,260,289)(H3,211,254,261,290)(H3,212,255,262,291)(H3,213,256,263,292)(H3,214,257,264,293)(H3,215,258,265,294)
- InChIKey
- RBYVOISEHOXMEN-UHFFFAOYSA-N
- Compound name
- 2-amino-9-[4-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[5-(6-aminopurin-9-yl)-3-[[5-(6-aminopurin-9-yl)-3-[[5-(6-aminopurin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-sulfanylphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-1H-purin-6-one
- Related CIDs
2D Structure
Profile
Predicted Collision Cross Section
Adduct | m/z | Predicted CCS (Ų) |
---|---|---|
[M+H]+ | 6495.6777 | 311.5 |
[M+Na]+ | 6517.6596 | 311.5 |
[M-H]- | 6493.6631 | 311.5 |
[M+NH4]+ | 6512.7042 | 311.5 |
[M+K]+ | 6533.6336 | 311.5 |
[M+H-H2O]+ | 6477.6677 | 311.5 |
[M+HCOO]- | 6539.6686 | 311.5 |
[M+CH3COO]- | 6553.6843 | 311.5 |
[M+Na-2H]- | 6515.6451 | 311.5 |
[M]+ | 6494.6699 | 311.5 |
[M]- | 6494.6709 | 311.5 |
Literature stripe
No literature data available for this compound.
Patent stripe
No patent data available for this compound.