CID 16133530
5'-d[tggagaccggggttggggaa]-3' phosphorothioate oligonucleotide
Structural Information
- Molecular Formula
- C198H244N87O98P19S19
- SMILES
- CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)OP(=S)(O)OCC3C(CC(O3)N4C=NC5=C4N=C(NC5=O)N)OP(=S)(O)OCC6C(CC(O6)N7C=NC8=C7N=C(NC8=O)N)OP(=S)(O)OCC9C(CC(O9)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)O)S
- InChI
- InChI=1S/C198H244N87O98P19S19/c1-70-28-268(196(304)263-169(70)288)118-9-74(93(31-286)345-118)365-385(308,404)327-40-102-82(17-124(354-102)275-59-228-139-158(275)241-183(205)252-172(139)291)374-396(319,415)338-45-107-88(23-130(359-107)281-65-234-145-164(281)247-189(211)258-178(145)297)377-395(318,414)334-39-101-81(16-123(353-101)274-58-227-138-153(204)219-54-223-157(138)274)372-392(315,411)337-43-105-86(21-128(357-105)279-63-232-143-162(279)245-187(209)256-176(143)295)376-394(317,413)333-38-100-80(15-122(352-100)273-57-226-137-152(203)218-53-222-156(137)273)371-390(313,409)329-34-96-75(10-116(348-96)266-6-4-113(199)239-194(266)302)366-386(309,405)328-33-95-76(11-117(347-95)267-7-5-114(200)240-195(267)303)367-387(310,406)335-41-103-84(19-126(355-103)277-61-230-141-160(277)243-185(207)254-174(141)293)378-397(320,416)341-47-109-90(25-132(361-109)283-67-236-147-166(283)249-191(213)260-180(147)299)382-401(324,420)343-49-111-89(24-131(363-111)282-66-235-146-165(282)248-190(212)259-179(146)298)380-399(322,418)339-44-106-83(18-125(358-106)276-60-229-140-159(276)242-184(206)253-173(140)292)373-391(314,410)331-36-98-77(12-119(350-98)269-29-71(2)170(289)264-197(269)305)368-388(311,407)330-35-97-78(13-120(349-97)270-30-72(3)171(290)265-198(270)306)369-389(312,408)336-42-104-85(20-127(356-104)278-62-231-142-161(278)244-186(208)255-175(142)294)379-398(321,417)342-48-110-91(26-133(362-110)284-68-237-148-167(284)250-192(214)261-181(148)300)383-402(325,421)344-50-112-92(27-134(364-112)285-69-238-149-168(285)251-193(215)262-182(149)301)381-400(323,419)340-46-108-87(22-129(360-108)280-64-233-144-163(280)246-188(210)257-177(144)296)375-393(316,412)332-37-99-79(14-121(351-99)272-56-225-136-151(202)217-52-221-155(136)272)370-384(307,403)326-32-94-73(287)8-115(346-94)271-55-224-135-150(201)216-51-220-154(135)271/h4-7,28-30,51-69,73-112,115-134,286-287H,8-27,31-50H2,1-3H3,(H,307,403)(H,308,404)(H,309,405)(H,310,406)(H,311,407)(H,312,408)(H,313,409)(H,314,410)(H,315,411)(H,316,412)(H,317,413)(H,318,414)(H,319,415)(H,320,416)(H,321,417)(H,322,418)(H,323,419)(H,324,420)(H,325,421)(H2,199,239,302)(H2,200,240,303)(H2,201,216,220)(H2,202,217,221)(H2,203,218,222)(H2,204,219,223)(H,263,288,304)(H,264,289,305)(H,265,290,306)(H3,205,241,252,291)(H3,206,242,253,292)(H3,207,243,254,293)(H3,208,244,255,294)(H3,209,245,256,295)(H3,210,246,257,296)(H3,211,247,258,297)(H3,212,248,259,298)(H3,213,249,260,299)(H3,214,250,261,300)(H3,215,251,262,301)
- InChIKey
- WPULZIURHYHZAF-UHFFFAOYSA-N
- Compound name
- 1-[4-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(6-aminopurin-9-yl)-3-[[5-(6-aminopurin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-sulfanylphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
- Related CIDs
2D Structure
Profile
Predicted Collision Cross Section
Adduct | m/z | Predicted CCS (Ų) |
---|---|---|
[M+H]+ | 6604.6567 | 311.5 |
[M+Na]+ | 6626.6386 | 311.5 |
[M-H]- | 6602.6421 | 311.5 |
[M+NH4]+ | 6621.6832 | 311.5 |
[M+K]+ | 6642.6126 | 311.5 |
[M+H-H2O]+ | 6586.6467 | 311.5 |
[M+HCOO]- | 6648.6476 | 311.5 |
[M+CH3COO]- | 6662.6633 | 311.5 |
[M+Na-2H]- | 6624.6241 | 311.5 |
[M]+ | 6603.6489 | 311.5 |
[M]- | 6603.6499 | 311.5 |
Literature stripe
No literature data available for this compound.
Patent stripe
No patent data available for this compound.