5'-d[gaggtgggcttcggtggtga]-3' phosphorothioate oligonucleotide

Structural Information

Molecular Formula

C₁₉₈H₂₄₆N₈₁O₁₀₂P₁₉S₁₉

SMILES

CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=S)(O)OC3CC(OC3COP(=S)(O)OC4CC(OC4COP(=S)(O)OC5CC(OC5COP(=O)(OC6CC(OC6COP(=S)(O)OC7CC(OC7COP(=S)(O)OC8CC(OC8COP(=S)(O)OC9CC(OC9COP(=S)(O)OC1CC(OC1COP(=S)(O)OC1CC(OC1CO)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=C(C(=O)NC1=O)C)N1C=NC2=C1N=C(NC2=O)N)S)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)O

InChI

InChI=1S/C198H246N81O102P19S19/c1-70-30-262(194(300)255-165(70)282)120-14-79(366-386(309,405)326-37-97-78(13-119(345-97)261-9-7-116(200)232-193(261)299)365-385(308,404)333-46-106-90(25-132(354-106)275-65-226-145-160(275)239-187(209)250-176(145)293)377-396(319,415)339-51-111-87(22-129(359-111)272-62-223-142-157(272)236-184(206)247-173(142)290)374-393(316,412)331-42-102-82(17-123(350-102)265-33-73(4)168(285)258-197(265)303)369-389(312,408)335-47-107-91(26-133(355-107)276-66-227-146-161(276)240-188(210)251-177(146)294)378-397(320,416)340-52-112-88(23-130(360-112)273-63-224-143-158(273)237-185(207)248-174(143)291)375-392(315,411)330-41-101-81(16-122(349-101)264-32-72(3)167(284)257-196(264)302)368-388(311,407)334-45-105-85(20-127(353-105)270-60-221-140-155(270)234-182(204)245-171(140)288)371-382(305,401)324-36-96-75(281)10-117(344-96)267-57-218-137-150(201)214-55-216-152(137)267)100(348-120)40-329-387(310,406)367-80-15-121(263-31-71(2)166(283)256-195(263)301)347-99(80)39-328-384(307,403)364-77-12-118(260-8-6-115(199)231-192(260)298)346-98(77)38-327-391(314,410)373-86-21-128(271-61-222-141-156(271)235-183(205)246-172(141)289)358-110(86)50-338-399(322,418)381-94-29-136(279-69-230-149-164(279)243-191(213)254-180(149)297)362-114(94)54-342-398(321,417)379-92-27-134(277-67-228-147-162(277)241-189(211)252-178(147)295)356-108(92)48-336-390(313,409)370-83-18-124(266-34-74(5)169(286)259-198(266)304)351-103(83)43-332-394(317,413)376-89-24-131(274-64-225-144-159(274)238-186(208)249-175(144)292)361-113(89)53-341-400(323,419)380-93-28-135(278-68-229-148-163(278)242-190(212)253-179(148)296)357-109(93)49-337-395(318,414)372-84-19-125(268-58-219-138-151(202)215-56-217-153(138)268)352-104(84)44-325-383(306,402)363-76-11-126(343-95(76)35-280)269-59-220-139-154(269)233-181(203)244-170(139)287/h6-9,30-34,55-69,75-114,117-136,280-281H,10-29,35-54H2,1-5H3,(H,305,401)(H,306,402)(H,307,403)(H,308,404)(H,309,405)(H,310,406)(H,311,407)(H,312,408)(H,313,409)(H,314,410)(H,315,411)(H,316,412)(H,317,413)(H,318,414)(H,319,415)(H,320,416)(H,321,417)(H,322,418)(H,323,419)(H2,199,231,298)(H2,200,232,299)(H2,201,214,216)(H2,202,215,217)(H,255,282,300)(H,256,283,301)(H,257,284,302)(H,258,285,303)(H,259,286,304)(H3,203,233,244,287)(H3,204,234,245,288)(H3,205,235,246,289)(H3,206,236,247,290)(H3,207,237,248,291)(H3,208,238,249,292)(H3,209,239,250,293)(H3,210,240,251,294)(H3,211,241,252,295)(H3,212,242,253,296)(H3,213,243,254,297)

InChIKey

KYZUXLILRXSXQI-UHFFFAOYSA-N

Compound name

1-[5-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-(hydroxymethyl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(6-aminopurin-9-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-sulfanylphosphoryl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphinothioyl]oxymethyl]-4-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(6-aminopurin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]-5-methylpyrimidine-2,4-dione

Related CIDs

• CID 16133524