CID 16131964
Hiv-1 12-mer tar rna containing 2'-o-methyl and 2',4'-locked nucleotides: 5'-[2'-ome(u)-lna(c)-2'-ome(u)-lna(c)-2'-ome(c)-lna(c)-2'-ome(a)-2'-ome(g)-2'-ome(g)-lna(c)-2'-ome(u)-2'-ome(a)-l-homoserine-6-carboxyfluorescein]
Structural Information
- Molecular Formula
- C153H185N43O93P12
- SMILES
- CC1=CN(C(=O)N=C1N)C2C3C(C(O2)(CO3)COP(=O)(O)OC4C(OC(C4OC)N5C=CC(=O)NC5=O)CO)OP(=O)(O)OCC6C(C(C(O6)N7C=CC(=O)NC7=O)OC)OP(=O)(O)OCC89COC(C8OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC12COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C(N=CN=C31)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C1N=C(NC3=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC3=C1N=C(NC3=O)N)OC)OP(=O)(O)OCC13COC(C1OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=O)NC1=O)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC4=C(N=CN=C41)N)OC)OP(=O)(O)OCC[C@@H](C(=O)N)NC(=O)C1=CC4=C(C=C1)C(=O)OC41C4=C(C=C(C=C4)O)OC4=C1C=CC(=C4)O)C(O3)N1C=C(C(=NC1=O)N)C)C(O2)N1C=C(C(=NC1=O)N)C)C(O9)N1C=C(C(=NC1=O)N)C
- InChI
- InChI=1S/C153H185N43O93P12/c1-58-32-189(145(212)177-112(58)155)134-104-108(149(273-134,44-248-104)48-260-298(232,233)278-88-72(36-197)265-126(96(88)240-5)186-25-20-81(200)174-142(186)209)286-296(228,229)258-42-75-91(99(243-8)129(268-75)188-27-22-83(202)176-144(188)211)284-300(236,237)262-50-150-45-249-105(135(274-150)190-33-59(2)113(156)178-146(190)213)109(150)288-295(226,227)257-41-74-90(98(242-7)127(266-74)185-24-19-80(154)173-141(185)208)283-299(234,235)261-49-151-46-250-107(137(275-151)192-35-61(4)115(158)180-148(192)215)111(151)289-297(230,231)259-43-79-93(101(245-10)131(270-79)194-55-169-85-117(160)165-53-167-120(85)194)281-292(220,221)254-38-77-94(102(246-11)132(271-77)195-56-170-86-121(195)181-139(162)183-124(86)205)282-293(222,223)255-39-78-95(103(247-12)133(272-78)196-57-171-87-122(196)182-140(163)184-125(87)206)285-301(238,239)263-51-152-47-251-106(136(276-152)191-34-60(3)114(157)179-147(191)214)110(152)287-294(224,225)256-40-73-89(97(241-6)128(267-73)187-26-21-82(201)175-143(187)210)280-291(218,219)253-37-76-92(100(244-9)130(269-76)193-54-168-84-116(159)164-52-166-119(84)193)279-290(216,217)252-28-23-69(118(161)203)172-123(204)62-13-16-65-68(29-62)153(277-138(65)207)66-17-14-63(198)30-70(66)264-71-31-64(199)15-18-67(71)153/h13-22,24-27,29-35,52-57,69,72-79,88-111,126-137,197-199H,23,28,36-51H2,1-12H3,(H2,161,203)(H,172,204)(H,216,217)(H,218,219)(H,220,221)(H,222,223)(H,224,225)(H,226,227)(H,228,229)(H,230,231)(H,232,233)(H,234,235)(H,236,237)(H,238,239)(H2,154,173,208)(H2,155,177,212)(H2,156,178,213)(H2,157,179,214)(H2,158,180,215)(H2,159,164,166)(H2,160,165,167)(H,174,200,209)(H,175,201,210)(H,176,202,211)(H3,162,181,183,205)(H3,163,182,184,206)/t69-,72?,73?,74?,75?,76?,77?,78?,79?,88?,89?,90?,91?,92?,93?,94?,95?,96?,97?,98?,99?,100?,101?,102?,103?,104?,105?,106?,107?,108?,109?,110?,111?,126?,127?,128?,129?,130?,131?,132?,133?,134?,135?,136?,137?,149?,150?,151?,152?/m0/s1
- InChIKey
- IOVVGXRUVBBMAL-SEKTYSLLSA-N
- Compound name
- [7-[[3-[[7-[[3-[[7-[[3-[[3-[[3-[[7-[[3-[[3-[[(3S)-4-amino-3-[(3',6'-dihydroxy-1-oxospiro[2-benzofuran-3,9'-xanthene]-5-carbonyl)amino]-4-oxobutoxy]-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-2,5-dioxabicyclo[2.2.1]heptan-1-yl]methoxy-hydroxyphosphoryl]oxy-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(2-amino-6-oxo-1H-purin-9-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-2,5-dioxabicyclo[2.2.1]heptan-1-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-2,5-dioxabicyclo[2.2.1]heptan-1-yl]methoxy-hydroxyphosphoryl]oxy-5-(2,4-dioxopyrimidin-1-yl)-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-3-(4-amino-5-methyl-2-oxopyrimidin-1-yl)-2,5-dioxabicyclo[2.2.1]heptan-1-yl]methyl [5-(2,4-dioxopyrimidin-1-yl)-2-(hydroxymethyl)-4-methoxyoxolan-3-yl] hydrogen phosphate
- Related CIDs
2D Structure
Profile
Predicted Collision Cross Section
Adduct | m/z | Predicted CCS (Ų) |
---|---|---|
[M+H]+ | 4484.7993 | 312.7 |
[M+Na]+ | 4506.7812 | 313.0 |
[M-H]- | 4482.7847 | 312.8 |
[M+NH4]+ | 4501.8258 | 312.8 |
[M+K]+ | 4522.7552 | 312.7 |
[M+H-H2O]+ | 4466.7893 | 312.4 |
[M+HCOO]- | 4528.7902 | 312.7 |
[M+CH3COO]- | 4542.8059 | 312.7 |
[M+Na-2H]- | 4504.7667 | 313.1 |
[M]+ | 4483.7915 | 312.9 |
[M]- | 4483.7925 | 312.9 |
Literature stripe
No literature data available for this compound.
Patent stripe
No patent data available for this compound.