CID 16130386

Fos-20 oligonucleotide-cholesterol deriv.

Structural Information

Molecular Formula
C224H293N79O118P20
SMILES
CC1=CN(C(=O)NC1=O)C2CC(C(O2)COP(=O)(O)OC3CC(OC3COP(=O)(O)OC4CC(OC4COP(=O)(O)OC5CC(OC5COP(=O)(O)OC6CC(OC6COP(=O)(O)OC7CC(OC7COP(=O)(O)OC8CC(OC8COP(=O)(O)OC9CC(OC9COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(O)OC1CC(OC1COP(=O)(NCC(=O)OC1CCC2(C3CCC4(C(C3CC=C2C1)CCC4C(C)CCCC(C)C)C)C)O)N1C=C(C(=O)NC1=O)C)N1C=C(C(=O)NC1=O)C)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)N1C=CC(=NC1=O)N)N1C=CC(=NC1=O)N)N1C=CC(=NC1=O)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C1N=C(NC2=O)N)N1C=NC2=C(N=CN=C21)N)N1C=NC2=C(N=CN=C21)N)N1C=CC(=NC1=O)N)N1C=NC2=C(N=CN=C21)N)N1C=C(C(=O)NC1=O)C)N1C=CC(=NC1=O)N)N1C=NC2=C(N=CN=C21)N)O
InChI
InChI=1S/C224H293N79O118P20/c1-96(2)11-10-12-97(3)105-15-16-106-104-14-13-102-31-103(17-24-223(102,8)107(104)18-25-224(105,106)9)382-173(305)52-268-422(322,323)362-58-129-114(38-159(389-129)290-54-99(5)205(307)281-220(290)319)408-429(336,337)369-64-135-116(40-161(390-135)292-56-101(7)207(309)283-222(292)321)410-431(340,341)380-75-146-126(50-171(401-146)302-94-266-183-202(302)275-212(239)278-209(183)311)420-440(358,359)376-71-142-123(47-168(397-142)299-91-263-180-191(236)247-83-255-199(180)299)417-437(352,353)375-70-141-121(45-166(396-141)297-89-261-178-189(234)245-81-253-197(178)297)415-435(348,349)373-68-139-118(42-163(394-139)294-86-258-175-186(231)242-78-250-194(175)294)412-432(342,343)367-62-133-110(34-155(387-133)285-27-20-149(226)270-215(285)314)404-425(328,329)364-59-130-109(33-154(384-130)284-26-19-148(225)269-214(284)313)403-424(326,327)365-60-131-111(35-156(385-131)286-28-21-150(227)271-216(286)315)407-428(334,335)379-74-145-125(49-170(400-145)301-93-265-182-201(301)274-211(238)277-208(182)310)419-439(356,357)378-73-144-124(48-169(399-144)300-92-264-181-192(237)248-84-256-200(181)300)418-438(354,355)381-76-147-127(51-172(402-147)303-95-267-184-203(303)276-213(240)279-210(184)312)421-441(360,361)377-72-143-122(46-167(398-143)298-90-262-179-190(235)246-82-254-198(179)298)416-436(350,351)374-69-140-119(43-164(395-140)295-87-259-176-187(232)243-79-251-195(176)295)413-433(344,345)368-63-134-113(37-158(388-134)288-30-23-152(229)273-218(288)317)406-427(332,333)372-67-138-120(44-165(393-138)296-88-260-177-188(233)244-80-252-196(177)296)414-434(346,347)370-65-136-115(39-160(391-136)291-55-100(6)206(308)282-221(291)320)409-430(338,339)366-61-132-112(36-157(386-132)287-29-22-151(228)272-217(287)316)405-426(330,331)371-66-137-117(41-162(392-137)293-85-257-174-185(230)241-77-249-193(174)293)411-423(324,325)363-57-128-108(304)32-153(383-128)289-53-98(4)204(306)280-219(289)318/h13,19-23,26-30,53-56,77-97,103-147,153-172,304H,10-12,14-18,24-25,31-52,57-76H2,1-9H3,(H,324,325)(H,326,327)(H,328,329)(H,330,331)(H,332,333)(H,334,335)(H,336,337)(H,338,339)(H,340,341)(H,342,343)(H,344,345)(H,346,347)(H,348,349)(H,350,351)(H,352,353)(H,354,355)(H,356,357)(H,358,359)(H,360,361)(H2,225,269,313)(H2,226,270,314)(H2,227,271,315)(H2,228,272,316)(H2,229,273,317)(H2,230,241,249)(H2,231,242,250)(H2,232,243,251)(H2,233,244,252)(H2,234,245,253)(H2,235,246,254)(H2,236,247,255)(H2,237,248,256)(H2,268,322,323)(H,280,306,318)(H,281,307,319)(H,282,308,320)(H,283,309,321)(H3,238,274,277,310)(H3,239,275,278,311)(H3,240,276,279,312)
InChIKey
KLHYMIGDZWAVNR-UHFFFAOYSA-N
Compound name
[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[3-[[3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[5-(6-aminopurin-9-yl)-3-[hydroxy-[[3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-N-[2-[[10,13-dimethyl-17-(6-methylheptan-2-yl)-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-2-oxoethyl]phosphonamidic acid
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

6596.4106 Da
Monoisotopic Mass

-29.7
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 6597.4179 311.5
[M+Na]+ 6619.3998 311.5
[M-H]- 6595.4033 311.5
[M+NH4]+ 6614.4444 311.5
[M+K]+ 6635.3738 311.5
[M+H-H2O]+ 6579.4079 311.5
[M+HCOO]- 6641.4088 311.5
[M+CH3COO]- 6655.4245 311.5
[M+Na-2H]- 6617.3853 311.5
[M]+ 6596.4101 311.5
[M]- 6596.4111 311.5
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.