CID 16130384

(3-5)hexadecylaminoacetate conjugated oligonucleotide(p-ttgaaacccgagaacatcat)

Structural Information

Molecular Formula
C213H281N79O118P20
SMILES
CCCCCCCCCCCCCCCCOC(=O)CNP(=O)(O)OCC1C(CC(O1)N2C=C(C(=O)NC2=O)C)OP(=O)(O)OCC3C(CC(O3)N4C=C(C(=O)NC4=O)C)OP(=O)(O)OCC5C(CC(O5)N6C=NC7=C6N=C(NC7=O)N)OP(=O)(O)OCC8C(CC(O8)N9C=NC1=C(N=CN=C19)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=O)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=O)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=O)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)O
InChI
InChI=1S/C213H281N79O118P20/c1-6-7-8-9-10-11-12-13-14-15-16-17-18-19-30-351-164(294)51-257-411(311,312)352-57-120-105(37-150(378-120)279-53-96(3)196(296)270-211(279)308)397-418(325,326)359-63-126-107(39-152(379-126)281-55-98(5)198(298)272-213(281)310)399-420(329,330)370-74-137-117(49-162(390-137)291-93-255-174-193(291)264-203(228)267-200(174)300)409-429(347,348)366-70-133-114(46-159(386-133)288-90-252-171-182(225)236-82-244-190(171)288)406-426(341,342)365-69-132-112(44-157(385-132)286-88-250-169-180(223)234-80-242-188(169)286)404-424(337,338)363-67-130-109(41-154(383-130)283-85-247-166-177(220)231-77-239-185(166)283)401-421(331,332)357-61-124-101(33-146(376-124)274-26-21-140(215)259-206(274)303)393-414(317,318)354-58-121-100(32-145(373-121)273-25-20-139(214)258-205(273)302)392-413(315,316)355-59-122-102(34-147(374-122)275-27-22-141(216)260-207(275)304)396-417(323,324)369-73-136-116(48-161(389-136)290-92-254-173-192(290)263-202(227)266-199(173)299)408-428(345,346)368-72-135-115(47-160(388-135)289-91-253-172-183(226)237-83-245-191(172)289)407-427(343,344)371-75-138-118(50-163(391-138)292-94-256-175-194(292)265-204(229)268-201(175)301)410-430(349,350)367-71-134-113(45-158(387-134)287-89-251-170-181(224)235-81-243-189(170)287)405-425(339,340)364-68-131-110(42-155(384-131)284-86-248-167-178(221)232-78-240-186(167)284)402-422(333,334)358-62-125-104(36-149(377-125)277-29-24-143(218)262-209(277)306)395-416(321,322)362-66-129-111(43-156(382-129)285-87-249-168-179(222)233-79-241-187(168)285)403-423(335,336)360-64-127-106(38-151(380-127)280-54-97(4)197(297)271-212(280)309)398-419(327,328)356-60-123-103(35-148(375-123)276-28-23-142(217)261-208(276)305)394-415(319,320)361-65-128-108(40-153(381-128)282-84-246-165-176(219)230-76-238-184(165)282)400-412(313,314)353-56-119-99(293)31-144(372-119)278-52-95(2)195(295)269-210(278)307/h20-29,52-55,76-94,99-138,144-163,293H,6-19,30-51,56-75H2,1-5H3,(H,313,314)(H,315,316)(H,317,318)(H,319,320)(H,321,322)(H,323,324)(H,325,326)(H,327,328)(H,329,330)(H,331,332)(H,333,334)(H,335,336)(H,337,338)(H,339,340)(H,341,342)(H,343,344)(H,345,346)(H,347,348)(H,349,350)(H2,214,258,302)(H2,215,259,303)(H2,216,260,304)(H2,217,261,305)(H2,218,262,306)(H2,219,230,238)(H2,220,231,239)(H2,221,232,240)(H2,222,233,241)(H2,223,234,242)(H2,224,235,243)(H2,225,236,244)(H2,226,237,245)(H2,257,311,312)(H,269,295,307)(H,270,296,308)(H,271,297,309)(H,272,298,310)(H3,227,263,266,299)(H3,228,264,267,300)(H3,229,265,268,301)
InChIKey
CEVZLFRWZJERLY-UHFFFAOYSA-N
Compound name
[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[3-[[3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[5-(6-aminopurin-9-yl)-3-[hydroxy-[[3-hydroxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy]phosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-N-(2-hexadecoxy-2-oxoethyl)phosphonamidic acid
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

6452.317 Da
Monoisotopic Mass

-30.9
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 6453.3243 311.5
[M+Na]+ 6475.3062 311.5
[M-H]- 6451.3097 311.5
[M+NH4]+ 6470.3508 311.5
[M+K]+ 6491.2802 311.5
[M+H-H2O]+ 6435.3143 311.5
[M+HCOO]- 6497.3152 311.5
[M+CH3COO]- 6511.3309 311.5
[M+Na-2H]- 6473.2917 311.5
[M]+ 6452.3165 311.5
[M]- 6452.3175 311.5
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

literature stripe

Patent stripe

No patent data available for this compound.