CID 16130364

5'-tctgggtaattacagcaagc-3', phosphorothioate backbone

Structural Information

Molecular Formula
C196H246N77O98P19S19
SMILES
CC1=CN(C(=O)NC1=O)C2CC(C(O2)CO)OP(=S)(O)OCC3C(CC(O3)N4C=CC(=NC4=O)N)OP(=S)(O)OCC5C(CC(O5)N6C=C(C(=O)NC6=O)C)OP(=S)(O)OCC7C(CC(O7)N8C=NC9=C8N=C(NC9=O)N)OP(=O)(OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=C(C(=O)NC1=O)C)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C(N=CN=C21)N)OP(=S)(O)OCC1C(CC(O1)N1C=NC2=C1N=C(NC2=O)N)OP(=S)(O)OCC1C(CC(O1)N1C=CC(=NC1=O)N)O)S
InChI
InChI=1S/C196H246N77O98P19S19/c1-76-34-258(192(290)249-173(76)276)129-15-82(101(39-274)333-129)353-373(296,392)315-41-103-83(16-126(335-103)255-11-7-122(198)236-189(255)287)354-374(297,393)318-44-106-87(20-131(338-106)260-36-78(3)175(278)251-194(260)292)360-380(303,399)328-55-117-99(32-143(349-117)272-74-233-154-171(272)242-186(210)247-181(154)284)370-389(312,408)332-58-120-100(33-144(352-120)273-75-234-155-172(273)243-187(211)248-182(155)285)371-390(313,409)331-57-119-98(31-142(351-119)271-73-232-153-170(271)241-185(209)246-180(153)283)369-384(307,403)321-47-109-89(22-133(341-109)262-38-80(5)177(280)253-196(262)294)359-379(302,398)325-51-113-94(27-138(345-113)267-69-228-149-160(205)216-63-222-166(149)267)365-386(309,405)326-52-114-91(24-135(346-114)264-66-225-146-157(202)213-60-219-163(146)264)363-383(306,402)320-46-108-86(19-130(340-108)259-35-77(2)174(277)250-193(259)291)357-377(300,396)319-45-107-88(21-132(339-107)261-37-79(4)176(279)252-195(261)293)358-378(301,397)324-50-112-90(23-134(344-112)263-65-224-145-156(201)212-59-218-162(145)263)362-381(304,400)316-42-104-84(17-127(336-104)256-12-8-123(199)237-190(256)288)355-375(298,394)323-49-111-93(26-137(343-111)266-68-227-148-159(204)215-62-221-165(148)266)366-388(311,407)330-56-118-97(30-141(350-118)270-72-231-152-169(270)240-184(208)245-179(152)282)368-382(305,401)317-43-105-85(18-128(337-105)257-13-9-124(200)238-191(257)289)356-376(299,395)322-48-110-92(25-136(342-110)265-67-226-147-158(203)214-61-220-164(147)265)364-385(308,404)327-53-115-95(28-139(347-115)268-70-229-150-161(206)217-64-223-167(150)268)367-387(310,406)329-54-116-96(29-140(348-116)269-71-230-151-168(269)239-183(207)244-178(151)281)361-372(295,391)314-40-102-81(275)14-125(334-102)254-10-6-121(197)235-188(254)286/h6-13,34-38,59-75,81-120,125-144,274-275H,14-33,39-58H2,1-5H3,(H,295,391)(H,296,392)(H,297,393)(H,298,394)(H,299,395)(H,300,396)(H,301,397)(H,302,398)(H,303,399)(H,304,400)(H,305,401)(H,306,402)(H,307,403)(H,308,404)(H,309,405)(H,310,406)(H,311,407)(H,312,408)(H,313,409)(H2,197,235,286)(H2,198,236,287)(H2,199,237,288)(H2,200,238,289)(H2,201,212,218)(H2,202,213,219)(H2,203,214,220)(H2,204,215,221)(H2,205,216,222)(H2,206,217,223)(H,249,276,290)(H,250,277,291)(H,251,278,292)(H,252,279,293)(H,253,280,294)(H3,207,239,244,281)(H3,208,240,245,282)(H3,209,241,246,283)(H3,210,242,247,284)(H3,211,243,248,285)
InChIKey
GFOXITGZUCMFEE-UHFFFAOYSA-N
Compound name
1-[4-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxyoxolan-2-yl]methoxy-sulfanylphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphinothioyl]oxy-5-(hydroxymethyl)oxolan-2-yl]-5-methylpyrimidine-2,4-dione
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

6441.6343 Da
Monoisotopic Mass

-6.7
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 6442.6416 311.5
[M+Na]+ 6464.6235 311.5
[M-H]- 6440.6270 311.5
[M+NH4]+ 6459.6681 311.5
[M+K]+ 6480.5975 311.5
[M+H-H2O]+ 6424.6316 311.5
[M+HCOO]- 6486.6325 311.5
[M+CH3COO]- 6500.6482 311.5
[M+Na-2H]- 6462.6090 311.5
[M]+ 6441.6338 311.5
[M]- 6441.6348 311.5
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.