CID 16130304

Anti-tar 2'-o-methyl oligonucleotide

Structural Information

Molecular Formula
C168H227N58O111P15
SMILES
CC1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OC3C(OC(C3OC)N4C=CC(=NC4=O)N)COP(=O)(O)OC5C(OC(C5OC)N6C=NC7=C6N=C(NC7=O)N)CO)OP(=O)(O)OCC8C(C(C(O8)N9C=CC(=NC9=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=C(C(=O)NC1=O)C)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C1N=C(NC2=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=NC2=C(N=CN=C21)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)OP(=O)(O)OCC1C(C(C(O1)N1C=CC(=NC1=O)N)OC)O)OC
InChI
InChI=1S/C168H227N58O111P15/c1-60-35-219(167(244)209-131(60)229)146-117(285-12)101(71(316-146)46-300-342(254,255)327-95-64(309-140(111(95)279-6)213-29-21-80(171)193-161(213)238)39-293-339(248,249)323-93-62(37-227)307-149(109(93)277-4)222-55-186-87-126(222)199-154(178)204-133(87)231)331-346(262,263)296-43-68-97(113(281-8)142(313-68)215-31-23-82(173)195-163(215)240)326-341(252,253)294-41-66-96(112(280-7)141(311-66)214-30-22-81(172)194-162(214)239)325-340(250,251)295-42-67-99(115(283-10)144(312-67)217-33-25-84(175)197-165(217)242)329-344(258,259)304-50-75-106(122(290-17)152(320-75)225-58-189-90-129(225)202-157(181)207-136(90)234)336-351(272,273)306-52-77-107(123(291-18)153(322-77)226-59-190-91-130(226)203-158(182)208-137(91)235)337-352(274,275)305-51-76-104(120(288-15)150(321-76)223-56-187-88-127(223)200-155(179)205-134(88)232)334-349(268,269)299-45-70-98(114(282-9)143(315-70)216-32-24-83(174)196-164(216)241)328-343(256,257)301-47-72-102(118(286-13)147(317-72)220-36-61(2)132(230)210-168(220)245)332-347(264,265)297-44-69-100(116(284-11)145(314-69)218-34-26-85(176)198-166(218)243)330-345(260,261)303-49-74-105(121(289-16)151(319-74)224-57-188-89-128(224)201-156(180)206-135(89)233)335-350(270,271)302-48-73-103(119(287-14)148(318-73)221-54-185-86-124(177)183-53-184-125(86)221)333-348(266,267)298-40-65-94(110(278-5)139(310-65)212-28-20-79(170)192-160(212)237)324-338(246,247)292-38-63-92(228)108(276-3)138(308-63)211-27-19-78(169)191-159(211)236/h19-36,53-59,62-77,92-123,138-153,227-228H,37-52H2,1-18H3,(H,246,247)(H,248,249)(H,250,251)(H,252,253)(H,254,255)(H,256,257)(H,258,259)(H,260,261)(H,262,263)(H,264,265)(H,266,267)(H,268,269)(H,270,271)(H,272,273)(H,274,275)(H2,169,191,236)(H2,170,192,237)(H2,171,193,238)(H2,172,194,239)(H2,173,195,240)(H2,174,196,241)(H2,175,197,242)(H2,176,198,243)(H2,177,183,184)(H,209,229,244)(H,210,230,245)(H3,178,199,204,231)(H3,179,200,205,232)(H3,180,201,206,233)(H3,181,202,207,234)(H3,182,203,208,235)
InChIKey
XURGKJLNQRWPMS-UHFFFAOYSA-N
Compound name
[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-[[[2-[[[2-[[[2-[[[2-[[[2-[[[5-(2-amino-6-oxo-1H-purin-9-yl)-2-(hydroxymethyl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-5-(4-amino-2-oxopyrimidin-1-yl)-4-methoxyoxolan-3-yl]oxy-hydroxyphosphoryl]oxymethyl]-4-methoxyoxolan-3-yl] [3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-[[5-(4-amino-2-oxopyrimidin-1-yl)-3-hydroxy-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-4-methoxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)-4-methoxyoxolan-2-yl]methyl hydrogen phosphate
Related CIDs

2D Structure

compound 2d structure
1
Annotation Hits

1
References

0
Patents

5296.9966 Da
Monoisotopic Mass

-42.2
XlogP (predicted)

Profile

Predicted Collision Cross Section

Adduct m/z Predicted CCS (Ų)
[M+H]+ 5298.0039 312.0
[M+Na]+ 5319.9858 312.1
[M-H]- 5295.9893 312.0
[M+NH4]+ 5315.0304 312.0
[M+K]+ 5335.9598 312.0
[M+H-H2O]+ 5279.9939 312.0
[M+HCOO]- 5341.9948 312.0
[M+CH3COO]- 5356.0105 312.0
[M+Na-2H]- 5317.9713 312.0
[M]+ 5296.9961 312.1
[M]- 5296.9971 312.1
m/z: mass to charge ratio of the adduct.
Predicted Collision Cross Section (CCS) values (Ų) per adduct calculated using CCSbase.

Literature stripe

No literature data available for this compound.

Patent stripe

No patent data available for this compound.